Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RAB18RAB18, member RAS oncogene family. (232 aa)    
Predicted Functional Partners:
GDI2
GDP dissociation inhibitor 2.
   
 0.817
RAB3GAP1
RAB3 GTPase activating protein catalytic subunit 1.
    
 0.787
RAB3GAP2
RAB3 GTPase activating non-catalytic protein subunit 2.
     
 0.766
RAB2A
RAB2A, member RAS oncogene family.
   
  0.630
TBC1D23
TBC1 domain family member 23.
      
 0.607
ENSPCLP00000007639
annotation not available
     
 0.603
VPS37B
VPS37B subunit of ESCRT-I.
    
 
 0.571
CUL3
Cullin 3.
    
   0.559
TBC1D20
TBC1 domain family member 20.
      
 0.557
RABGGTB
Rab geranylgeranyltransferase subunit beta.
     
 0.546
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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