STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB18RAB18, member RAS oncogene family. (232 aa)    
Predicted Functional Partners:
RAB3GAP1
RAB3 GTPase activating protein catalytic subunit 1.
    
 0.759
RAB3GAP2
RAB3 GTPase activating non-catalytic protein subunit 2.
     
 0.738
GDI2
GDP dissociation inhibitor 2.
   
 0.705
ENSPCLP00000007639
annotation not available
     
 0.618
RABGGTB
Rab geranylgeranyltransferase subunit beta.
     
 0.614
PTAR1
Protein prenyltransferase alpha subunit repeat containing 1.
    
 0.612
DCTN6
Dynactin subunit 6.
     
 0.577
DCTN4
Dynactin subunit 4.
   
 
  0.574
SRPRA
SRP receptor subunit alpha.
   
  
 0.569
ACTR1A
Actin related protein 1A.
     
 0.564
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.