STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHCTF1AT-hook containing transcription factor 1. (2272 aa)    
Predicted Functional Partners:
NUP133
Nucleoporin 133.
   
 0.997
NUP107
Nucleoporin 107.
    
 0.997
SEC13
SEC13 homolog, nuclear pore and COPII coat complex component.
    
 0.997
NUP160
Nucleoporin 160.
   
 0.997
NUP37
Nucleoporin 37.
    
 0.996
NUP98
Nucleoporin 98.
   
 0.996
NUP85
Nucleoporin 85.
    
 0.996
SEH1L
SEH1 like nucleoporin.
   
 0.995
NUP43
Nucleoporin 43.
    
 0.995
NCOA5
Nuclear receptor coactivator 5.
   
 0.978
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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