Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
QPCTGlutaminyl-peptide cyclotransferase. (434 aa)    
Predicted Functional Partners:
NUBP1
Nucleotide binding protein 1.
    
   0.877
ENSPCLP00000024756
annotation not available
      
 0.813
LARGE2
LARGE xylosyl- and glucuronyltransferase 2.
      
 0.791
NIF3L1
NGG1 interacting factor 3 like 1.
    
   0.778
OSTM1
Osteoclastogenesis associated transmembrane protein 1.
   
  
 0.725
NUBP2
Nucleotide binding protein 2.
    
   0.717
COPZ1
Coatomer protein complex subunit zeta 1.
      
 0.668
ENSPCLP00000016664
annotation not available
      
 0.615
TRABD
TraB domain containing.
      
 0.611
UFM1
Ubiquitin fold modifier 1.
      
 0.606
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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