Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CRIM1Cysteine rich transmembrane BMP regulator 1. (1198 aa)    
Predicted Functional Partners:
FEZ2
Fasciculation and elongation protein zeta 2.
      
 0.653
ENSPCLP00000020164
annotation not available
   
  0.633
KCNS1
Potassium voltage-gated channel modifier subfamily S member 1.
   
 
 0.610
SEMA3G
Semaphorin 3G.
     
 0.610
OMA1
OMA1 zinc metallopeptidase.
      
 0.570
TMEM159
Transmembrane protein 159.
      
 0.557
S100A10
S100 calcium binding protein A10.
      
 0.555
NUP214
Nucleoporin 214.
    
 0.551
NUP98
Nucleoporin 98.
    
 0.540
NUP43
Nucleoporin 43.
    
 0.534
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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