Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC36A4Solute carrier family 36 member 4. (494 aa)    
Predicted Functional Partners:
FAT1
FAT atypical cadherin 1.
      
 0.734
AAGAB
Alpha and gamma adaptin binding protein.
      
 0.601
SLC38A9
Solute carrier family 38 member 9.
    
 
 0.588
IQCA1
IQ motif containing with AAA domain 1.
   
  
 0.574
SETD2
SET domain containing 2, histone lysine methyltransferase.
    
 
 0.563
DLST
Dihydrolipoamide S-succinyltransferase.
      
 0.557
CCDC149
Coiled-coil domain containing 149.
      
 0.556
CHRND
Cholinergic receptor nicotinic delta subunit.
      
 0.556
ADGB
Androglobin.
      
 0.555
FEM1C
Fem-1 homolog C.
      
 0.502
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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