STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VSTM5V-set and transmembrane domain containing 5. (198 aa)    
Predicted Functional Partners:
C11orf54
Chromosome 11 open reading frame 54.
      
 0.773
ENSPCLP00000001359
annotation not available
      
 0.773
HEPHL1
Hephaestin like 1.
      
 0.690
LRRN3
Leucine rich repeat neuronal 3.
      
 0.567
SMCO4
Single-pass membrane protein with coiled-coil domains 4.
      
 0.567
ENSPCLP00000001353
annotation not available
      
 0.565
GPR83
G protein-coupled receptor 83.
      
 0.562
HEPH
Hephaestin.
      
 0.562
LRRN2
Leucine rich repeat neuronal 2.
      
 0.562
DSCAML1
DS cell adhesion molecule like 1.
      
 0.553
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.