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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR61WD repeat domain 61. (308 aa)    
Predicted Functional Partners:
SKIV2L
Ski2 like RNA helicase.
    
 0.999
TTC37
Tetratricopeptide repeat domain 37.
    
 0.999
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.998
CDC73
Cell division cycle 73.
    
 0.998
CTR9
CTR9 homolog, Paf1/RNA polymerase II complex component.
    
 0.998
PAF1
PAF1 homolog, Paf1/RNA polymerase II complex component.
   
 0.997
SUPT5H
SPT5 homolog, DSIF elongation factor subunit.
    
 0.992
RTF1
RTF1 homolog, Paf1/RNA polymerase II complex component.
    
 0.988
ERCC6
ERCC excision repair 6, chromatin remodeling factor.
   
 0.974
SUPT4H1
SPT4 homolog, DSIF elongation factor subunit.
   
 0.973
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.