STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HEPHL1Hephaestin like 1. (1104 aa)    
Predicted Functional Partners:
VMA21
Vacuolar ATPase assembly factor VMA21.
    
 
 0.805
ENSPCLP00000001359
annotation not available
   
  
 0.774
C11orf54
Chromosome 11 open reading frame 54.
      
 0.768
SLC40A1
Solute carrier family 40 member 1.
    
 0.717
FECH
Ferrochelatase.
   
 
 0.706
VSTM5
V-set and transmembrane domain containing 5.
      
 0.690
FXN
Frataxin.
     
 0.653
ATP7A
ATPase copper transporting alpha.
  
 
 0.614
ATP7B
ATPase copper transporting beta.
  
 
 0.614
CP
Ceruloplasmin.
  
  
 
0.585
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.