Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HEPHL1Hephaestin like 1. (1104 aa)    
Predicted Functional Partners:
FECH
Ferrochelatase.
   
 
 0.946
FXN
Frataxin.
     
 0.917
ENSPCLP00000017131
annotation not available
     
 0.909
HMOX2
Heme oxygenase 2.
     
 0.906
HMOX1
Heme oxygenase 1.
     
 0.906
HEPH
Hephaestin.
  
  
 
0.902
CP
Ceruloplasmin.
  
  
 
0.902
SLC40A1
Solute carrier family 40 member 1.
    
 0.842
VMA21
Vacuolar ATPase assembly factor VMA21.
    
 
 0.660
C11orf54
Chromosome 11 open reading frame 54.
      
 0.652
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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