STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
IQSEC1IQ motif and Sec7 domain ArfGEF 1. (1155 aa)    
Predicted Functional Partners:
ARF6
ADP ribosylation factor 6.
    
 
 0.835
ARL15
ADP ribosylation factor like GTPase 15.
    
 
 0.509
ZNFX1
Zinc finger NFX1-type containing 1.
      
 0.475
DLGAP3
DLG associated protein 3.
   
 
 0.452
APBA2
Amyloid beta precursor protein binding family A member 2.
    
   0.436
DLGAP1
DLG associated protein 1.
   
 
 0.432
INSYN1
Inhibitory synaptic factor 1.
      
 0.412
BBOF1
Basal body orientation factor 1.
      
 0.411
CYTH4
Cytohesin 4.
    
 
 0.407
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.