Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CIB2Calcium and integrin binding family member 2. (187 aa)    
Predicted Functional Partners:
TMC1
Transmembrane channel like 1.
    
 0.898
TMC3
Transmembrane channel like 3.
    
 0.888
LHFPL5
LHFPL tetraspan subfamily member 5.
     
 0.787
USH1G
USH1 protein network component sans.
    
 0.724
LHFPL3
LHFPL tetraspan subfamily member 3.
     
 0.696
LHFPL4
LHFPL tetraspan subfamily member 4.
     
 0.696
USH1C
USH1 protein network component harmonin.
    
 
 0.695
WHRN
Whirlin.
    
 
 0.693
TMC2
Transmembrane channel like 2.
    
 0.691
USH2A
Usherin.
    
 0.675
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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