Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D2BTBC1 domain family member 2B. (947 aa)    
Predicted Functional Partners:
RAB7A
RAB7A, member RAS oncogene family.
    
 0.786
WDR90
WD repeat domain 90.
    
   0.717
RAB31
RAB31, member RAS oncogene family.
    
 0.635
NME8
NME/NM23 family member 8.
    
 
 0.597
EFHB
EF-hand domain family member B.
    
   0.563
ENSPCLP00000023047
annotation not available
    
   0.563
ENKUR
Enkurin, TRPC channel interacting protein.
    
   0.563
ENSPCLP00000004358
annotation not available
    
   0.559
TBC1D13
TBC1 domain family member 13.
      
 0.555
MEPCE
Methylphosphate capping enzyme.
      
 0.553
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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