STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCDC82Coiled-coil domain containing 82. (460 aa)    
Predicted Functional Partners:
GPALPP1
GPALPP motifs containing 1.
      
 0.690
FAN1
FANCD2 and FANCI associated nuclease 1.
      
 0.557
C11orf54
Chromosome 11 open reading frame 54.
      
 0.556
MLH3
mutL homolog 3.
      
 0.556
PMS1
PMS1 homolog 1, mismatch repair system component.
      
 0.556
TBC1D22B
TBC1 domain family member 22B.
      
 0.554
LRRC39
Leucine rich repeat containing 39.
      
 0.522
WRNIP1
WRN helicase interacting protein 1.
      
 0.451
ASPHD2
Aspartate beta-hydroxylase domain containing 2.
      
 0.449
NDUFAF6
NADH:ubiquinone oxidoreductase complex assembly factor 6.
      
 0.448
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.