Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ARHGAP42Rho GTPase activating protein 42. (874 aa)    
Predicted Functional Partners:
GFOD1
Glucose-fructose oxidoreductase domain containing 1.
      
 0.925
ARHGAP10
Rho GTPase activating protein 10.
    
   0.692
CDC42EP2
CDC42 effector protein 2.
    
   0.600
C2CD2
C2 calcium dependent domain containing 2.
    
   0.593
CDC42SE1
CDC42 small effector 1.
      
 0.555
CDC42
Cell division cycle 42.
    
 0.554
MAIP1
Matrix AAA peptidase interacting protein 1.
      
 0.479
ENSPCLP00000019252
annotation not available
    
 0.477
RHOA
Ras homolog family member A.
    
 0.477
RHOB
Ras homolog family member B.
    
 0.477
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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