Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
TRPC6Transient receptor potential cation channel subfamily C member 6. (895 aa)    
Predicted Functional Partners:
NPHS2
NPHS2 stomatin family member, podocin.
    
 
 0.874
STIM1
Stromal interaction molecule 1.
    
 0.771
STIM2
Stromal interaction molecule 2.
    
 0.759
TRPC1
Transient receptor potential cation channel subfamily C member 1.
    
 0.709
PLCE1
Phospholipase C epsilon 1.
    
 
 0.701
TRPV2
Transient receptor potential cation channel subfamily V member 2.
     
 0.663
TRPA1
Transient receptor potential cation channel subfamily A member 1.
   
 
 0.649
TRPM2
Transient receptor potential cation channel subfamily M member 2.
    
 0.645
ATE1
Arginyltransferase 1.
      
 0.619
TRPV1
Transient receptor potential cation channel subfamily V member 1.
     
 0.612
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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