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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YIPF4Yip1 domain family member 4. (250 aa)    
Predicted Functional Partners:
YIPF1
Yip1 domain family member 1.
    
 
 0.924
YIPF3
Yip1 domain family member 3.
    
 
 0.900
YIF1B
Yip1 interacting factor homolog B, membrane trafficking protein.
    
 
 0.816
SLC66A3
Solute carrier family 66 member 3.
      
 0.758
DOLPP1
Dolichyldiphosphatase 1.
      
 0.685
ENSPCLP00000024761
annotation not available
    
  0.576
ENSPCLP00000021166
annotation not available
      
 0.568
TMEM41A
Transmembrane protein 41A.
      
 0.567
ENSPCLP00000010579
annotation not available
      
 0.567
ENSPCLP00000019910
annotation not available
   
  
 0.536
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.