STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFCC1EF-hand and coiled-coil domain containing 1. (275 aa)    
Predicted Functional Partners:
ERMN
Ermin.
      
 0.610
TRPC1
Transient receptor potential cation channel subfamily C member 1.
      
 0.601
ENSPCLP00000003404
annotation not available
      
 0.599
PFDN4
Prefoldin subunit 4.
      
 0.557
LYPD6
LY6/PLAUR domain containing 6.
      
 0.557
FKBP9
FKBP prolyl isomerase 9.
      
 0.555
KCNG2
Potassium voltage-gated channel modifier subfamily G member 2.
      
 0.554
KCNS1
Potassium voltage-gated channel modifier subfamily S member 1.
      
 0.539
EFCAB11
EF-hand calcium binding domain 11.
      
 0.468
EFHC2
EF-hand domain containing 2.
      
 0.466
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.