GP9 protein (Phasianus colchicus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

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Co-occurrence

Co-expression

Experiments

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[Homology]

Score

GP9

Glycoprotein IX platelet. (190 aa)

Predicted Functional Partners:

ENSPCLP00000021788

0.999

GP1BB

0.996

ENSPCLP00000009577

0.799

CPN2

0.799

LRRC15

0.799

ENSPCLP00000009580

0.799

ENSPCLP00000008307

0.783

VWF

0.754

ENSPCLP00000021677

0.754

ENSPCLP00000024353

0.754

Your Current Organism:

Phasianus colchicus

NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CPN2	ENSPCLP00000008307	ENSPCLP00000009578	ENSPCLP00000008307	Carboxypeptidase N subunit 2.	annotation not available	0.467
CPN2	ENSPCLP00000021788	ENSPCLP00000009578	ENSPCLP00000021788	Carboxypeptidase N subunit 2.	annotation not available	0.625
CPN2	GP1BB	ENSPCLP00000009578	ENSPCLP00000006199	Carboxypeptidase N subunit 2.	Glycoprotein Ib platelet subunit beta.	0.688
CPN2	GP9	ENSPCLP00000009578	ENSPCLP00000001436	Carboxypeptidase N subunit 2.	Glycoprotein IX platelet.	0.799
ENSPCLP00000008307	CPN2	ENSPCLP00000008307	ENSPCLP00000009578	annotation not available	Carboxypeptidase N subunit 2.	0.467
ENSPCLP00000008307	ENSPCLP00000009577	ENSPCLP00000008307	ENSPCLP00000009577	annotation not available	annotation not available	0.467
ENSPCLP00000008307	ENSPCLP00000009580	ENSPCLP00000008307	ENSPCLP00000009580	annotation not available	annotation not available	0.467
ENSPCLP00000008307	ENSPCLP00000021677	ENSPCLP00000008307	ENSPCLP00000021677	annotation not available	annotation not available	0.601
ENSPCLP00000008307	ENSPCLP00000021788	ENSPCLP00000008307	ENSPCLP00000021788	annotation not available	annotation not available	0.961
ENSPCLP00000008307	ENSPCLP00000024353	ENSPCLP00000008307	ENSPCLP00000024353	annotation not available	annotation not available	0.601
ENSPCLP00000008307	GP1BB	ENSPCLP00000008307	ENSPCLP00000006199	annotation not available	Glycoprotein Ib platelet subunit beta.	0.803
ENSPCLP00000008307	GP9	ENSPCLP00000008307	ENSPCLP00000001436	annotation not available	Glycoprotein IX platelet.	0.783
ENSPCLP00000008307	LRRC15	ENSPCLP00000008307	ENSPCLP00000009579	annotation not available	Leucine rich repeat containing 15.	0.467
ENSPCLP00000008307	VWF	ENSPCLP00000008307	ENSPCLP00000015072	annotation not available	Von Willebrand factor.	0.601
ENSPCLP00000009577	ENSPCLP00000008307	ENSPCLP00000009577	ENSPCLP00000008307	annotation not available	annotation not available	0.467
ENSPCLP00000009577	ENSPCLP00000021788	ENSPCLP00000009577	ENSPCLP00000021788	annotation not available	annotation not available	0.637
ENSPCLP00000009577	GP1BB	ENSPCLP00000009577	ENSPCLP00000006199	annotation not available	Glycoprotein Ib platelet subunit beta.	0.688
ENSPCLP00000009577	GP9	ENSPCLP00000009577	ENSPCLP00000001436	annotation not available	Glycoprotein IX platelet.	0.799
ENSPCLP00000009580	ENSPCLP00000008307	ENSPCLP00000009580	ENSPCLP00000008307	annotation not available	annotation not available	0.467
ENSPCLP00000009580	ENSPCLP00000021788	ENSPCLP00000009580	ENSPCLP00000021788	annotation not available	annotation not available	0.626