Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCLP00000001437annotation not available (158 aa)    
Predicted Functional Partners:
RABGGTB
Rab geranylgeranyltransferase subunit beta.
    
 0.769
TRAPPC8
Trafficking protein particle complex 8.
    
 0.742
USO1
USO1 vesicle transport factor.
   
 0.737
GDI2
GDP dissociation inhibitor 2.
   
 0.711
USP6NL
USP6 N-terminal like.
    
 0.685
ENSPCLP00000017198
annotation not available
    
 0.685
TRAPPC4
Trafficking protein particle complex 4.
   
 0.680
TRAPPC5
Trafficking protein particle complex 5.
    
 0.678
TRAPPC6B
Trafficking protein particle complex 6B.
    
 0.677
TRAPPC2B
Trafficking protein particle complex 2B.
    
 0.659
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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