Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALPK3Alpha kinase 3. (1314 aa)    
Predicted Functional Partners:
CCDC174
Coiled-coil domain containing 174.
      
 0.613
ENSPCLP00000008849
annotation not available
      
 0.557
ARID5B
AT-rich interaction domain 5B.
      
 0.556
NEURL2
Neuralized E3 ubiquitin protein ligase 2.
      
 0.536
ENSPCLP00000018621
annotation not available
      
 0.469
CLSTN2
Calsyntenin 2.
      
 0.464
LYST
Lysosomal trafficking regulator.
      
 0.449
FSTL3
Follistatin like 3.
      
 0.447
NOM1
Nucleolar protein with MIF4G domain 1.
      
 0.446
FREM2
FRAS1 related extracellular matrix 2.
      
 0.444
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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