Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FBXL22F-box and leucine rich repeat protein 22. (135 aa)    
Predicted Functional Partners:
SKP1
S-phase kinase associated protein 1.
    
 0.830
CUL1
Cullin 1.
    
 0.704
ENSPCLP00000013089
annotation not available
    
 0.611
FBXO48
F-box protein 48.
      
 0.601
RNF7
Ring finger protein 7.
    
 0.571
RBX1
Ring-box 1.
    
 0.571
CUL3
Cullin 3.
    
 0.537
CACUL1
CDK2 associated cullin domain 1.
    
 0.524
FBXO25
F-box protein 25.
     
 0.518
FBXO47
F-box protein 47.
      
 0.499
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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