Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCLP00000001449annotation not available (171 aa)    
Predicted Functional Partners:
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
  
 0.924
SERBP1
SERPINE1 mRNA binding protein 1.
   
 
 0.859
RPL30
Ribosomal protein L30.
   
 
 0.788
RPL12
Ribosomal protein L12.
   
 
 0.768
RPL4
Ribosomal protein L4.
   
   0.723
OAZ1
Ornithine decarboxylase antizyme 1.
   
    0.719
MTREX
Mtr4 exosome RNA helicase.
   
 0.717
RPL8
Ribosomal protein L8.
   
   0.687
ENSPCLP00000020727
annotation not available
   
 
 0.684
ENSPCLP00000005655
annotation not available
   
   0.658
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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