Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SEC11ASEC11 homolog A, signal peptidase complex subunit. (179 aa)    
Predicted Functional Partners:
SPCS3
Signal peptidase complex subunit 3.
   
 0.969
SPCS1
Signal peptidase complex subunit 1.
   
 0.968
ENSPCLP00000020371
annotation not available
   
 0.944
SPCS2
Signal peptidase complex subunit 2.
   
 0.944
SEC11C
SEC11 homolog C, signal peptidase complex subunit.
  
  
 
0.901
GRPR
Gastrin releasing peptide receptor.
   
 0.848
BRS3
Bombesin receptor subtype 3.
   
 0.778
ALDH18A1
Aldehyde dehydrogenase 18 family member A1.
     
 0.650
NMBR
Neuromedin B receptor.
    
 0.626
DPP6
Dipeptidyl peptidase like 6.
   
 
 0.622
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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