STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP3Ubiquitin specific peptidase 3. (525 aa)    
Predicted Functional Partners:
ENY2
ENY2 transcription and export complex 2 subunit.
    
 0.890
TAF10
TATA-box binding protein associated factor 10.
    
 0.881
TRRAP
Transformation/transcription domain associated protein.
    
 0.878
TAF9
TATA-box binding protein associated factor 9.
    
 0.877
TAF12
TATA-box binding protein associated factor 12.
    
 0.875
TADA3
Transcriptional adaptor 3.
    
 0.871
SUPT3H
SPT3 homolog, SAGA and STAGA complex component.
    
 0.864
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.830
TADA1
Transcriptional adaptor 1.
    
  0.806
ENSPCLP00000015797
annotation not available
    
 0.792
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.