Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RAB8BRAB8B, member RAS oncogene family. (207 aa)    
Predicted Functional Partners:
MICALL2
MICAL like 2.
    
 0.948
RAB8A
RAB8A, member RAS oncogene family.
  
  
 
0.901
RILPL2
Rab interacting lysosomal protein like 2.
    
 
 0.837
EHBP1
EH domain binding protein 1.
    
 0.800
ENSPCLP00000003207
annotation not available
    
 0.764
GDI2
GDP dissociation inhibitor 2.
    
 0.761
EXOC4
Exocyst complex component 4.
    
 0.705
RILPL1
Rab interacting lysosomal protein like 1.
    
 0.702
RAB1A
RAB1A, member RAS oncogene family.
   
  0.689
OPTN
Optineurin.
   
 0.685
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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