Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LACTBLactamase beta. (475 aa)    
Predicted Functional Partners:
NSFL1C
NSFL1 cofactor.
    
   0.979
UBXN2A
UBX domain protein 2A.
    
   0.979
NUDCD1
NudC domain containing 1.
    
   0.884
UBXN2B
UBX domain protein 2B.
    
   0.802
ANLN
Anillin actin binding protein.
    
  0.702
PPM1L
Protein phosphatase, Mg2+/Mn2+ dependent 1L.
    
 
 0.639
INTS9
Integrator complex subunit 9.
    
 0.565
MRPS23
Mitochondrial ribosomal protein S23.
      
 0.557
ENSPCLP00000009728
annotation not available
      
 0.556
PISD
Phosphatidylserine decarboxylase.
      
 0.451
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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