Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRIP4Thyroid hormone receptor interactor 4. (566 aa)    
Predicted Functional Partners:
ASCC2
Activating signal cointegrator 1 complex subunit 2.
   
 0.999
ASCC3
Activating signal cointegrator 1 complex subunit 3.
   
 0.999
ASCC1
Activating signal cointegrator 1 complex subunit 1.
   
 
 0.993
MED4
Mediator complex subunit 4.
    
 
 0.982
MED23
Mediator complex subunit 23.
    
   0.979
ENSPCLP00000003612
annotation not available
    
   0.979
MED8
Mediator complex subunit 8.
    
   0.979
RCOR1
REST corepressor 1.
    
   0.979
ALKBH3
alkB homolog 3, alpha-ketoglutaratedependent dioxygenase.
    
 
 0.979
MED15
Mediator complex subunit 15.
    
   0.979
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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