STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LTBP1Latent transforming growth factor beta binding protein 1. (1656 aa)    
Predicted Functional Partners:
ENSPCLP00000019909
annotation not available
   
 0.976
TGFB2
Transforming growth factor beta 2.
    
 0.959
TGFB3
Transforming growth factor beta 3.
   
 0.959
THBS1
Thrombospondin 1.
     
 0.929
ARID4B
AT-rich interaction domain 4B.
    
 0.612
ARID4A
AT-rich interaction domain 4A.
    
 0.606
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.595
HNRNPAB
Heterogeneous nuclear ribonucleoprotein A/B.
    
 0.576
CTHRC1
Collagen triple helix repeat containing 1.
      
 0.564
ITGB6
Integrin subunit beta 6.
    
 0.562
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.