STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM98AFamily with sequence similarity 98 member A. (547 aa)    
Predicted Functional Partners:
RTRAF
RNA transcription, translation and transport factor.
    
 0.993
DDX1
DEAD-box helicase 1.
   
 0.987
RTCB
RNA 2',3'-cyclic phosphate and 5'-OH ligase.
    
 0.964
C2orf49
Chromosome 2 open reading frame 49.
     
 0.941
FAM98B
Family with sequence similarity 98 member B.
  
 
 
0.902
ATXN2
Ataxin 2.
    
 
 0.676
NUFIP2
Nuclear FMR1 interacting protein 2.
    
 
 0.675
HNRNPDL
Heterogeneous nuclear ribonucleoprotein D like.
      
 0.667
DHX15
DEAH-box helicase 15.
      
 0.637
LSM12
LSM12 homolog.
    
 
 0.627
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.