Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FAM98AFamily with sequence similarity 98 member A. (547 aa)    
Predicted Functional Partners:
RTCB
RNA 2',3'-cyclic phosphate and 5'-OH ligase.
    
 0.995
DDX1
DEAD-box helicase 1.
   
 
 0.994
FAM98B
Family with sequence similarity 98 member B.
  
 
0.990
RTRAF
RNA transcription, translation and transport factor.
    
 
 0.987
NUFIP2
Nuclear FMR1 interacting protein 2.
    
 
 0.978
ATXN2
Ataxin 2.
    
 
 0.949
G3BP1
G3BP stress granule assembly factor 1.
   
 
 0.940
C2orf49
Chromosome 2 open reading frame 49.
     
 0.833
G3BP2
G3BP stress granule assembly factor 2.
   
 
 0.745
ENSPCLP00000016863
annotation not available
    
   0.717
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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