Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZNF318Zinc finger protein 318. (2258 aa)    
Predicted Functional Partners:
NCBP1
Nuclear cap binding protein subunit 1.
    
 0.765
ENSPCLP00000020115
annotation not available
   
 0.746
ENSPCLP00000012929
annotation not available
   
 0.727
U2AF2
U2 small nuclear RNA auxiliary factor 2.
   
 0.714
SRRM1
Serine and arginine repetitive matrix 1.
   
 0.703
HINFP
Histone H4 transcription factor.
      
 0.699
ALYREF
Aly/REF export factor.
   
 0.689
POLDIP3
DNA polymerase delta interacting protein 3.
   
 0.689
YLPM1
YLP motif containing 1.
   
  
 0.679
TNPO3
Transportin 3.
    
 
 0.676
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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