Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSPH9Radial spoke head component 9. (275 aa)    
Predicted Functional Partners:
EFHC1
EF-hand domain containing 1.
  
 
 0.997
RSPH4A
Radial spoke head component 4A.
  
 
 0.994
RSPH1
Radial spoke head component 1.
   
 
 0.988
RSPH3
Radial spoke head 3.
  
 
 0.983
EIF3H
Eukaryotic translation initiation factor 3 subunit H.
    
   0.976
DNAI1
Dynein axonemal intermediate chain 1.
   
 
 0.959
EIF3A
Eukaryotic translation initiation factor 3 subunit A.
    
   0.958
PACRG
Parkin coregulated.
   
 
 0.957
CFAP52
Cilia and flagella associated protein 52.
   
 
 0.955
EIF3E
Eukaryotic translation initiation factor 3 subunit E.
    
   0.950
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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