Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MRPL14Mitochondrial ribosomal protein L14. (146 aa)    
Predicted Functional Partners:
MRPL20
Mitochondrial ribosomal protein L20.
   
 0.992
MRPL39
Mitochondrial ribosomal protein L39.
   
   0.981
NDUFAB1
NADH:ubiquinone oxidoreductase subunit AB1.
   
  0.979
MRPS12
Mitochondrial ribosomal protein S12.
   
 
 0.978
MALSU1
Mitochondrial assembly of ribosomal large subunit 1.
   
 0.977
MRPL41
Mitochondrial ribosomal protein L41.
   
 0.976
MRPL47
Mitochondrial ribosomal protein L47.
   
  0.975
MRPS30
Mitochondrial ribosomal protein S30.
   
   0.974
ENSPCLP00000014180
annotation not available
   
  0.973
ENSPCLP00000006209
annotation not available
   
   0.972
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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