Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
B2MBeta-2-microglobulin. (121 aa)    
Predicted Functional Partners:
RPA3
Replication protein A3.
   
 0.983
RPA1
Replication protein A1.
   
 0.982
ENSPCLP00000021570
annotation not available
   
0.976
ENSPCLP00000020215
annotation not available
    
 0.964
WRN
WRN RecQ like helicase.
   
 0.928
DNA2
DNA replication helicase/nuclease 2.
   
 0.921
ENSPCLP00000021535
annotation not available
   
 0.921
RAD52
RAD52 homolog, DNA repair protein.
    
 0.916
ATR
ATR serine/threonine kinase.
   
 0.915
PCNA
Proliferating cell nuclear antigen.
   
 0.912
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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