Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RPS17Ribosomal protein S17. (135 aa)    
Predicted Functional Partners:
RPS21
Ribosomal protein S21.
   
 0.999
RPS12
Ribosomal protein S12.
   
 0.999
RPS3A
Ribosomal protein S3A.
   
 0.999
RPS16
Ribosomal protein S16.
   
 0.999
RPL18A
Ribosomal protein L18a.
   
   0.999
RPL30
Ribosomal protein L30.
   
 
 0.999
RPL15
Ribosomal protein L15.
   
 
 0.999
RPL23A
Ribosomal protein L23a.
   
 
 0.999
RPL6
Ribosomal protein L6.
   
 
 0.999
RPSA
Ribosomal protein SA.
   
 0.999
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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