STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF8Ring finger protein 8. (523 aa)    
Predicted Functional Partners:
ENSPCLP00000011369
annotation not available
   
 0.976
UBE2V1
Ubiquitin conjugating enzyme E2 V1.
   
 0.949
ENSPCLP00000015797
annotation not available
    
 0.943
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.934
RNF168
Ring finger protein 168.
     
 0.928
UBE2V2
Ubiquitin conjugating enzyme E2 V2.
   
 0.893
DHTKD1
Dehydrogenase E1 and transketolase domain containing 1.
    
 
 0.892
OGDH
Oxoglutarate dehydrogenase.
    
 
 0.892
OGDHL
Oxoglutarate dehydrogenase like.
    
 
 0.892
PDHX
Pyruvate dehydrogenase complex component X.
   
 
 0.883
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.