STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMTR1Cap methyltransferase 1. (830 aa)    
Predicted Functional Partners:
POLG
DNA polymerase gamma, catalytic subunit.
   
    0.636
AMBRA1
Autophagy and beclin 1 regulator 1.
   
    0.633
DHX15
DEAH-box helicase 15.
   
 
 0.603
MED23
Mediator complex subunit 23.
  
   
 0.578
SUPT7L
SPT7 like, STAGA complex gamma subunit.
   
  
 0.576
RBM18
RNA binding motif protein 18.
      
 0.569
ENSPCLP00000003301
annotation not available
      
 0.567
ERC1
ELKS/RAB6-interacting/CAST family member 1.
      
 0.567
OST4
Oligosaccharyltransferase complex subunit 4, non-catalytic.
      
 0.567
ZDHHC9
Zinc finger DHHC-type containing 9.
      
 0.567
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.