Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MDGA1MAM domain containing glycosylphosphatidylinositol anchor 1. (929 aa)    
Predicted Functional Partners:
SHANK3
SH3 and multiple ankyrin repeat domains 3.
    
 
 0.540
GABRG3
Gamma-aminobutyric acid type A receptor gamma3 subunit.
   
  
 0.540
NLGN1
Neuroligin 1.
    
 
 0.520
SCARF1
Scavenger receptor class F member 1.
    
 
 0.452
TMEM19
Transmembrane protein 19.
      
 0.447
TMEM216
Transmembrane protein 216.
      
 0.447
SLC30A5
Solute carrier family 30 member 5.
   
  
 0.445
HACD4
3-hydroxyacyl-CoA dehydratase 4.
      
 0.442
RNPC3
RNA binding region (RNP1, RRM) containing 3.
      
 0.439
ENSPCLP00000019796
annotation not available
    
 
 0.430
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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