Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BTBD9BTB domain containing 9. (647 aa)    
Predicted Functional Partners:
FAF1
Fas associated factor 1.
    
   0.979
UBXN7
UBX domain protein 7.
    
   0.979
CUL3
Cullin 3.
    
 
 0.952
UQCRFS1
Ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1.
    
 0.844
ENSPCLP00000005767
annotation not available
   
 
 0.754
MRPL27
Mitochondrial ribosomal protein L27.
   
 
 0.748
MRPL19
Mitochondrial ribosomal protein L19.
   
 
 0.740
ENSPCLP00000024404
annotation not available
   
 
 0.736
MRPL3
Mitochondrial ribosomal protein L3.
    
 
 0.734
MRPS25
Mitochondrial ribosomal protein S25.
   
   0.722
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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