Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCLP00000001568annotation not available (609 aa)    
Predicted Functional Partners:
CDK1
Cyclin dependent kinase 1.
    
 0.975
AURKA
Aurora kinase A.
   
 0.962
ENSPCLP00000018191
annotation not available
   
 0.954
TENT2
Terminal nucleotidyltransferase 2.
   
 
 0.950
CCNB2
Cyclin B2.
   
 
 0.928
EFNB1
Ephrin B1.
      
 0.816
CSTF2
Cleavage stimulation factor subunit 2.
    
 
 0.807
PUF60
poly(U) binding splicing factor 60.
    
 
 0.770
PAPOLG
poly(A) polymerase gamma.
    
 
 0.739
SCRIB
Scribble planar cell polarity protein.
      
 0.729
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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