Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RAF1Raf-1 proto-oncogene, serine/threonine kinase. (667 aa)    
Predicted Functional Partners:
BRAF
B-Raf proto-oncogene, serine/threonine kinase.
  
0.999
YWHAB
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta.
    
 0.997
YWHAZ
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta.
    
 0.995
MAP2K1
Mitogen-activated protein kinase kinase 1.
   
0.991
ENSPCLP00000017974
annotation not available
   
0.991
MRAS
Muscle RAS oncogene homolog.
    
 0.990
NRAS
NRAS proto-oncogene, GTPase.
    
 0.989
KRAS
KRAS proto-oncogene, GTPase.
    
 0.988
HRAS
HRas proto-oncogene, GTPase.
    
 0.988
PAK2
P21 (RAC1) activated kinase 2.
    
 
0.985
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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