Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SYN2Synapsin II. (581 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
     
 0.781
STXBP1
Syntaxin binding protein 1.
     
 0.778
SNAP25
Synaptosome associated protein 25.
   
 0.766
SYT1
Synaptotagmin 1.
   
 0.741
ITSN2
Intersectin 2.
    
 
 0.738
SYT2
Synaptotagmin 2.
   
 0.725
VAMP1
Vesicle associated membrane protein 1.
   
 0.690
CASK
Calcium/calmodulin dependent serine protein kinase.
   
 0.663
ENSPCLP00000020058
annotation not available
   
 
 0.657
ITSN1
Intersectin 1.
    
 
 0.649
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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