Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RBKSRibokinase. (304 aa)    
Predicted Functional Partners:
RPIA
Ribose 5-phosphate isomerase A.
    
 0.974
TKT
Transketolase.
  
 0.973
DERA
Deoxyribose-phosphate aldolase.
    
 0.947
PGM2
Phosphoglucomutase 2.
  
 
 0.944
PRPS2
Phosphoribosyl pyrophosphate synthetase 2.
   
 0.944
ENSPCLP00000010121
annotation not available
   
 0.944
PGM1
Phosphoglucomutase 1.
     
 0.919
ENSPCLP00000003737
annotation not available
  
 
 0.868
GPI
Glucose-6-phosphate isomerase.
  
 
 0.815
SFI1
SFI1 centrin binding protein.
      
 0.811
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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