STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPP1CBProtein phosphatase 1 catalytic subunit beta. (328 aa)    
Predicted Functional Partners:
PPP1R12A
Protein phosphatase 1 regulatory subunit 12A.
   
 0.991
PPP1R12B
Protein phosphatase 1 regulatory subunit 12B.
   
 0.989
WDR82
WD repeat domain 82.
    
 0.989
PPP1CA
Protein phosphatase 1 catalytic subunit alpha.
  
 
0.985
PPP1R3D
Protein phosphatase 1 regulatory subunit 3D.
    
 0.980
PPP1R12C
Protein phosphatase 1 regulatory subunit 12C.
   
 0.979
CPSF2
Cleavage and polyadenylation specific factor 2.
   
 0.977
CPSF3
Cleavage and polyadenylation specific factor 3.
   
 0.977
EIF2S1
Eukaryotic translation initiation factor 2 subunit alpha.
   
 0.974
WDR33
WD repeat domain 33.
    
 0.974
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.