STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTC7ATetratricopeptide repeat domain 7A. (854 aa)    
Predicted Functional Partners:
PI4KA
Phosphatidylinositol 4-kinase alpha.
    
 
 0.924
FAM126A
Family with sequence similarity 126 member A.
    
 
 0.915
EFR3B
EFR3 homolog B.
   
 
 0.891
EFR3A
EFR3 homolog A.
   
 
 0.794
ENSPCLP00000011883
annotation not available
      
 0.765
FAM126B
Family with sequence similarity 126 member B.
    
 
 0.755
C3orf18
Chromosome 3 open reading frame 18.
      
 0.633
PLCH2
Phospholipase C eta 2.
      
 0.567
TTC28
Tetratricopeptide repeat domain 28.
      
 0.553
EOGT
EGF domain specific O-linked N-acetylglucosamine transferase.
      
 0.553
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.