Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SMYD1SET and MYND domain containing 1. (491 aa)    
Predicted Functional Partners:
MYOM2
Myomesin 2.
   
 
 0.922
MYOZ2
Myozenin 2.
   
  
 0.911
CAMKMT
Calmodulin-lysine N-methyltransferase.
     
 0.905
SRL
Sarcalumenin.
   
  
 0.895
CSRP3
Cysteine and glycine rich protein 3.
   
  
 0.849
APOBEC2
Apolipoprotein B mRNA editing enzyme catalytic subunit 2.
   
    0.839
ZBTB44
Zinc finger and BTB domain containing 44.
    
   0.790
UNC45B
Unc-45 myosin chaperone B.
   
  
 0.753
UNC45A
Unc-45 myosin chaperone A.
   
  
 0.753
HAND2
Heart and neural crest derivatives expressed 2.
    
 0.740
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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