Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MCFD2Multiple coagulation factor deficiency 2. (143 aa)    
Predicted Functional Partners:
LMAN1
Lectin, mannose binding 1.
   
 0.999
F8
Coagulation factor VIII.
     
 0.830
F5
Coagulation factor V.
     
 0.712
ENSPCLP00000013423
annotation not available
     
 0.675
SEC24A
SEC24 homolog A, COPII coat complex component.
     
 0.658
CTSC
Cathepsin C.
     
 0.630
CALML4
Calmodulin like 4.
      
 0.615
C3orf18
Chromosome 3 open reading frame 18.
      
 0.615
LMAN2
Lectin, mannose binding 2.
     
 0.614
WIPF2
WAS/WASL interacting protein family member 2.
      
 0.614
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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