Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CRIPTCXXC repeat containing interactor of PDZ3 domain. (132 aa)    
Predicted Functional Partners:
ENSPCLP00000014277
annotation not available
    
 
 0.910
PHF5A
PHD finger protein 5A.
   
   0.884
PRPF8
pre-mRNA processing factor 8.
    
   0.882
SF3B1
Splicing factor 3b subunit 1.
    
   0.882
ENSPCLP00000012972
annotation not available
    
   0.882
SF3B3
Splicing factor 3b subunit 3.
    
   0.882
CWC15
CWC15 spliceosome associated protein homolog.
   
   0.724
DLG3
Discs large MAGUK scaffold protein 3.
    
 
 0.723
DLG1
Discs large MAGUK scaffold protein 1.
    
 
 0.723
ENSPCLP00000023218
annotation not available
    
 
 0.723
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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