STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCLP00000001637annotation not available (145 aa)    
Predicted Functional Partners:
ENSPCLP00000009974
annotation not available
    
 0.600
LIN54
Lin-54 DREAM MuvB core complex component.
    
 0.596
FANCM
FA complementation group M.
    
 0.589
LIN9
Lin-9 DREAM MuvB core complex component.
    
 0.479
ENSPCLP00000008942
annotation not available
    
 0.445
RBBP7
RB binding protein 7, chromatin remodeling factor.
    
 0.445
RPA1
Replication protein A1.
    
 0.418
ENSPCLP00000014331
annotation not available
  
     0.418
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.