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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRPPRCLeucine rich pentatricopeptide repeat containing. (1371 aa)    
Predicted Functional Partners:
SLIRP
SRA stem-loop interacting RNA binding protein.
   
 
 0.925
ENSPCLP00000009810
annotation not available
     
 0.738
GFM1
G elongation factor mitochondrial 1.
   
  
 0.680
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
   
 
 0.656
NDUFS1
NADH:ubiquinone oxidoreductase core subunit S1.
   
 
 0.582
SCO2
SCO cytochrome c oxidase assembly protein 2.
    
 
 0.581
ENSPCLP00000012149
annotation not available
   
  
 0.580
C12orf65
Chromosome 12 open reading frame 65.
      
 0.569
ALPK3
Alpha kinase 3.
      
 0.567
BCS1L
BCS1 homolog, ubiquinol-cytochrome c reductase complex chaperone.
   
  
 0.565
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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