Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DYNC2LI1Dynein cytoplasmic 2 light intermediate chain 1. (354 aa)    
Predicted Functional Partners:
WDR60
WD repeat domain 60.
    
 0.999
WDR34
WD repeat domain 34.
    
 0.997
DYNC2H1
Dynein cytoplasmic 2 heavy chain 1.
   
 0.994
ENSPCLP00000011553
annotation not available
   
 0.981
DYNLRB2
Dynein light chain roadblock-type 2.
    
 0.968
TCTEX1D1
Tctex1 domain containing 1.
    
 0.886
DYNLL2
Dynein light chain LC8-type 2.
    
 0.869
ENSPCLP00000006527
annotation not available
    
 0.869
ENSPCLP00000006530
annotation not available
    
 0.869
TCTEX1D4
Tctex1 domain containing 4.
    
 0.866
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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