Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MRPL35Mitochondrial ribosomal protein L35. (195 aa)    
Predicted Functional Partners:
MRPL15
Mitochondrial ribosomal protein L15.
   
 0.994
MRPL20
Mitochondrial ribosomal protein L20.
   
 0.991
MRPL10
Mitochondrial ribosomal protein L10.
   
  0.990
ENSPCLP00000014180
annotation not available
   
 0.990
MRPL41
Mitochondrial ribosomal protein L41.
   
 0.990
MRPL47
Mitochondrial ribosomal protein L47.
   
  0.990
MRPL13
Mitochondrial ribosomal protein L13.
   
 
 0.989
MRPL50
Mitochondrial ribosomal protein L50.
   
 0.987
ENSPCLP00000011365
annotation not available
   
 0.985
MRPL12
Mitochondrial ribosomal protein L12.
   
 0.984
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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